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4 Commits
d08495a451
...
b333712d9c
| Author | SHA1 | Date | |
|---|---|---|---|
| b333712d9c | |||
| 29019f61e5 | |||
| 58ed5df87c | |||
| d4e0241590 |
@@ -15,6 +15,7 @@ add_executable(Google_Tests_run
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test3.cpp
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test3.cpp
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test4.cpp
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test4.cpp
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test5.cpp
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test5.cpp
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test6.cpp
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)
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)
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file(COPY test1/data1.npy DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/test1)
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file(COPY test1/data1.npy DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/test1)
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@@ -2,7 +2,6 @@
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// Created by david on 28.02.2026.
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// Created by david on 28.02.2026.
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//
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//
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#include <gtest/gtest.h>
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#include <gtest/gtest.h>
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#include "library.h"
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#include "iir_filter.h"
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#include "iir_filter.h"
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#include "npy.hpp"
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#include "npy.hpp"
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#include <utility>
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#include <utility>
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@@ -10,16 +9,6 @@
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#include <string>
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#include <string>
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#include <filesystem>
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#include <filesystem>
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// Demonstrate some basic assertions.
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TEST(HelloTest, BasicAssertions) {
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// Expect two strings not to be equal.
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EXPECT_STRNE("hello", "world from test1.cpp");
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// Expect equality.
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EXPECT_EQ(7 * 6, 42);
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printf("asdf");
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hello();
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}
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TEST(HelloTest, Load_npy_matrix) {
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TEST(HelloTest, Load_npy_matrix) {
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// "C:\\Users\\david\\Documents\\src\\libpasada\\cmake-build-debug\\google-tests"
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// "C:\\Users\\david\\Documents\\src\\libpasada\\cmake-build-debug\\google-tests"
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std::cout << std::filesystem::current_path() << std::endl;
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std::cout << std::filesystem::current_path() << std::endl;
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@@ -79,7 +79,7 @@ TEST(HelloTest, Filter_Delta_U) {
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// NOTE: later SSF must be fed -u, not u
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// NOTE: later SSF must be fed -u, not u
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TEST(HelloTest, Filter_SSF) {
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TEST(HelloTest, Filter_SSF) {
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SsfFilter f_ssf(3);
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SsfFilter f_ssf(FPS * 3/4); // target upslope_width = 3
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std::vector x { 1.0, 3.0, 2.0, 5.0, 1.0, 1.5 };
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std::vector x { 1.0, 3.0, 2.0, 5.0, 1.0, 1.5 };
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// du { 1.0, 2.0, -1.0, 3.0, -4.0, 0.5 }
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// du { 1.0, 2.0, -1.0, 3.0, -4.0, 0.5 }
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// duc { 1.0, 2.0, 0.0, 3.0, 0.0, 0.5 }
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// duc { 1.0, 2.0, 0.0, 3.0, 0.0, 0.5 }
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@@ -116,8 +116,7 @@ TEST(HelloTest, Zong_SSF_Stage2) {
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auto y_neg = apply_filter(f_neg, y);
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auto y_neg = apply_filter(f_neg, y);
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// Stage 2: sum slope function
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// Stage 2: sum slope function
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const size_t upslope_width = 4;
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SsfFilter f_ssf(FPS);
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SsfFilter f_ssf(upslope_width);
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auto ssf = apply_filter(f_ssf, y_neg);
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auto ssf = apply_filter(f_ssf, y_neg);
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npy_save("test2/ssf_t2_ssf.npy", ssf);
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npy_save("test2/ssf_t2_ssf.npy", ssf);
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@@ -148,22 +147,20 @@ TEST(HelloTest, Zong_SSF_Stage3) {
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//std::cerr << "before stage 2" << std::endl;
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//std::cerr << "before stage 2" << std::endl;
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// Stage 2: sum slope function
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// Stage 2: sum slope function
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const size_t upslope_width = 4;
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SsfFilter f_ssf(FPS);
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SsfFilter f_ssf(upslope_width);
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auto ssf = apply_filter(f_ssf, y_neg);
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auto ssf = apply_filter(f_ssf, y_neg);
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//std::cerr << "before stage 3" << std::endl;
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//std::cerr << "before stage 3" << std::endl;
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// Stage 3: threshold detection
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// Stage 3: threshold detection
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const size_t len_refr = (size_t) (FPS / (MAX_BPM / 60));
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DebugSsfStepDetectorThreshold f_ssd_thr(FPS);
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DebugSsfStepDetectorThreshold f_ssd_thr(len_refr);
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auto ssf_threshold = apply_filter(f_ssd_thr, ssf);
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auto ssf_threshold = apply_filter(f_ssd_thr, ssf);
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//std::cerr << "before writing results 1 and doing step detection" << std::endl;
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//std::cerr << "before writing results 1 and doing step detection" << std::endl;
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npy_save("test2/ssf_t2_ssf_threshold.npy", ssf_threshold);
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npy_save("test2/ssf_t2_ssf_threshold.npy", ssf_threshold);
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SsfStepDetector f_ssd(len_refr);
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SsfStepDetector f_ssd(FPS);
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auto steps = apply_filter(f_ssd, ssf);
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auto steps = apply_filter(f_ssd, ssf);
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//std::cerr << "before writing results 2" << std::endl;
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//std::cerr << "before writing results 2" << std::endl;
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@@ -151,9 +151,7 @@ TEST(SignalTest, RunningQuality_t2) {
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std::vector<double> signal = fetch_y_axis(acc);
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std::vector<double> signal = fetch_y_axis(acc);
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#if (FPS != 60)
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double fps = 60.0;
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#error "FPS must currently be 60, as highpass taps are pre-computed for that value"
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#endif
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// TODO: SQI: cehck input file
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// TODO: SQI: cehck input file
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// TODO: SQI: print debug values corr,idx, checkedSsf
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// TODO: SQI: print debug values corr,idx, checkedSsf
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@@ -174,22 +172,20 @@ TEST(SignalTest, RunningQuality_t2) {
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//std::cerr << "before stage 2" << std::endl;
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//std::cerr << "before stage 2" << std::endl;
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// Stage 2: sum slope function
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// Stage 2: sum slope function
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const size_t upslope_width = 4;
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SsfFilter f_ssf(fps);
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SsfFilter f_ssf(upslope_width);
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auto ssf = apply_filter(f_ssf, y_neg);
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auto ssf = apply_filter(f_ssf, y_neg);
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//std::cerr << "before stage 3" << std::endl;
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//std::cerr << "before stage 3" << std::endl;
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// Stage 3: threshold detection
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// Stage 3: threshold detection
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const size_t len_refr = (size_t) (FPS / (MAX_BPM / 60));
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DebugSsfStepDetectorThreshold f_ssd_thr(fps);
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DebugSsfStepDetectorThreshold f_ssd_thr(len_refr);
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auto ssf_threshold = apply_filter(f_ssd_thr, ssf);
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auto ssf_threshold = apply_filter(f_ssd_thr, ssf);
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//std::cerr << "before writing results 1 and doing step detection" << std::endl;
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//std::cerr << "before writing results 1 and doing step detection" << std::endl;
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npy_save("test2/ssf_t3_ssf_threshold.npy", ssf_threshold);
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npy_save("test2/ssf_t3_ssf_threshold.npy", ssf_threshold);
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SsfStepDetector f_ssd(len_refr);
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SsfStepDetector f_ssd(fps);
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auto steps = apply_filter(f_ssd, ssf);
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auto steps = apply_filter(f_ssd, ssf);
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//std::cerr << "before writing results 2" << std::endl;
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//std::cerr << "before writing results 2" << std::endl;
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@@ -11,14 +11,16 @@
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TEST(StepDetector, t1_sub_sample_resolution) {
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TEST(StepDetector, t1_sub_sample_resolution) {
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npy::npy_data s = npy::read_npy<double>("test4/step_150a.npy");
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npy::npy_data s = npy::read_npy<double>("test4/step_150a.npy");
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double fps = 60.0;
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std::vector<double> signal = fetch_y_axis(s);
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std::vector<double> signal = fetch_y_axis(s);
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const size_t N = signal.size();
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const size_t N = signal.size();
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const size_t N_INIT = SsfStepDetector::initial_samples();
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const size_t N_INIT = SsfStepDetector::initial_samples(fps);
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StepDetector det(nullptr, true);
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StepDetector det(fps, nullptr, true);
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// initialize: feed for priming the filters
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// initialize: feed for priming the filters
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det.primeFilters(signal);
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det.primeFilters(fps, signal);
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// feed for actual test
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// feed for actual test
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for (size_t i = 0; i < N; i++) {
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for (size_t i = 0; i < N; i++) {
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@@ -19,9 +19,7 @@ TEST(HelloTest, Zong_SSF_Test5_a1) {
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std::vector<double> signal = fetch_y_axis(acc, 2); // (ts, x, y, z) entries -> fetch 'y'
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std::vector<double> signal = fetch_y_axis(acc, 2); // (ts, x, y, z) entries -> fetch 'y'
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#if (FPS != 60)
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double fps = 60.0;
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#error "FPS must currently be 60, as highpass taps are pre-computed for that value"
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#endif
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// Butterworth filter: order=5, fc=0.5, fs=60, btype='highpass'
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// Butterworth filter: order=5, fc=0.5, fs=60, btype='highpass'
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std::vector b {0.91875845, -4.59379227, 9.18758454, -9.18758454, 4.59379227, -0.91875845};
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std::vector b {0.91875845, -4.59379227, 9.18758454, -9.18758454, 4.59379227, -0.91875845};
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@@ -40,15 +38,13 @@ TEST(HelloTest, Zong_SSF_Test5_a1) {
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//std::cerr << "before stage 2" << std::endl;
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//std::cerr << "before stage 2" << std::endl;
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// Stage 2: sum slope function
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// Stage 2: sum slope function
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const size_t upslope_width = 4;
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SsfFilter f_ssf(fps);
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SsfFilter f_ssf(upslope_width);
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auto ssf = apply_filter(f_ssf, y_neg);
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auto ssf = apply_filter(f_ssf, y_neg);
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//std::cerr << "before stage 3" << std::endl;
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//std::cerr << "before stage 3" << std::endl;
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// Stage 3: threshold detection
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// Stage 3: threshold detection
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const size_t len_refr = (size_t) (FPS / (MAX_BPM / 60));
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DebugSsfStepDetectorThreshold f_ssd_thr(fps);
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DebugSsfStepDetectorThreshold f_ssd_thr(len_refr);
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auto ssf_threshold = apply_filter(f_ssd_thr, ssf);
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auto ssf_threshold = apply_filter(f_ssd_thr, ssf);
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//std::cerr << "before writing results 1 and doing step detection" << std::endl;
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//std::cerr << "before writing results 1 and doing step detection" << std::endl;
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@@ -57,7 +53,7 @@ TEST(HelloTest, Zong_SSF_Test5_a1) {
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npy_save("test5/ssf_a1_ssf.npy", ssf);
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npy_save("test5/ssf_a1_ssf.npy", ssf);
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npy_save("test5/ssf_a1_ssf_threshold.npy", ssf_threshold);
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npy_save("test5/ssf_a1_ssf_threshold.npy", ssf_threshold);
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SsfStepDetector f_ssd(len_refr);
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SsfStepDetector f_ssd(fps);
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auto steps = apply_filter(f_ssd, ssf);
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auto steps = apply_filter(f_ssd, ssf);
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//std::cerr << "before writing results 2" << std::endl;
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//std::cerr << "before writing results 2" << std::endl;
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122
google-tests/test6.cpp
Normal file
122
google-tests/test6.cpp
Normal file
@@ -0,0 +1,122 @@
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//
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// Created by david on 19.05.2026.
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//
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#include <filesystem>
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#include <numeric>
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#include <random>
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#include <gtest/gtest.h>
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#include "pd_resamp.h"
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#include "pd_signal.h"
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#include "test_helpers.h"
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#define M_PI 3.14159265358979323846
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void make_test_signal_1(int N, std::vector<double> &ts, std::vector<double> &sig) {
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double f = 10.0;
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double fs = 100.0;
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pd_signal::linspace(ts, 0.0, (N-1) / fs * 1e9, N, false);
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sig.resize(N);
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for (int i = 0; i < N; i++) {
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sig[i] = std::cos(2 * M_PI * f * i / fs);
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}
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}
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void add_noise(std::vector<double>& x, double mu, double sigma) {
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if (sigma < 0.0) { throw std::invalid_argument("sigma must be non-negative"); }
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std::mt19937 rng { 42 }; /* std::random_device{}() */
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std::normal_distribution<double> dist(mu, sigma);
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for (double& v : x) {
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v += dist(rng);
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}
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}
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int make_spiky_times(int N_hint, std::vector<double>& ts_in, std::vector<double>& ts_out, std::vector<double> &sig_in, std::vector<double> &sig_out) {
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double fs = 100.0;
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// note that resulting indices will be 100 + halfdist, because of sampling rate change at i=100 => 120, 139, 149
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std::vector<int> spikes {140, 178, 198};
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std::vector<double> rel_spikes { 1.8, 5.6, 2.51 };
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int N = N_hint + static_cast<int>(std::accumulate(rel_spikes.begin(), rel_spikes.end(), 0) + 1.0);
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// at certain indices, add a larger time spike
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ts_out.resize(ts_in.size());
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std::ranges::copy(ts_in, ts_out.begin());
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for (int i = 0; i < spikes.size(); i++) {
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int i_spike = spikes[i];
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double dt_spike = (rel_spikes[i] - 1.0) * 1.0 / fs * 1e9;
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for (int j = i_spike; j < N_hint; j++) {
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ts_out[j] += dt_spike;
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}
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}
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// add gaussian noise to times
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add_noise(ts_out, 0.0, 0.01 / fs * 1e9);
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std::ranges::sort(ts_out); // make sure they remain sorted
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// reduce sampling rate in second half
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for (int i = 100; i < 100 + (N_hint - 100) / 2; i++) {
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ts_out[i] = ts_out[100 + (i-100)*2];
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}
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ts_out.resize(100 + (N_hint - 100) / 2);
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// compute signal at times
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pd_signal::interp(sig_out, ts_out, ts_in, sig_in);
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return N;
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}
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TEST(HelloTest, Resampler_Test1) {
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std::vector<double> ts_orig, ts_spiky;
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std::vector<double> a_orig, a_spiky;
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std::vector<double> sig_res;
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make_test_signal_1(207, ts_orig, a_orig); // N = 200+sum(rel_spikes)-len(rel_spikes)
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double fs = 1e9 / (ts_orig[1]-ts_orig[0]);
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//std::cout << "fs=" << fs << std::endl;
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make_spiky_times(200, ts_orig, ts_spiky, a_orig, a_spiky);
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Resampler res;
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const int INITIAL_SAMPLES = 100; // Resampler.INITIAL_SAMPLES;
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int i;
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// push - initial samples are buffered
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for (i = 0; i < INITIAL_SAMPLES - 1; i++) {
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res.push(ts_spiky[i], a_spiky[i]);
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ASSERT_FALSE(res.peek());
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}
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res.push(ts_spiky[i], a_spiky[i]);
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//ASSERT_NEAR(res.get_fs(), fs, 1e-7); // should fail
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ASSERT_NEAR(res.get_fs(), fs, 1e-2);
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// get - initial samples are pushed out
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sig_res.resize(ts_orig.size()+1); // despite gaussian time noise, sum(ts) should roughly be same length as we guessed initially
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for (i = 0; i < INITIAL_SAMPLES; i++) {
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ASSERT_TRUE(res.peek());
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sig_res[i] = res.get();
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}
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// push - additional samples are all pushed out
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int j = INITIAL_SAMPLES;
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for (i = INITIAL_SAMPLES; i < ts_spiky.size(); i++) {
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res.push(ts_spiky[i], a_spiky[i]);
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// potentially get multiple samples
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while (res.peek())
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sig_res[j++] = res.get();
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}
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std::filesystem::create_directories("test6");
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npy_save("test6/ts_orig_t1.npy", ts_orig);
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npy_save("test6/a_orig_t1.npy", a_orig);
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npy_save("test6/ts_spiky_t1.npy", ts_spiky);
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||||||
|
npy_save("test6/a_spiky_t1.npy", a_spiky);
|
||||||
|
|
||||||
|
npy_save("test6/sig_res_t1.npy", sig_res);
|
||||||
|
std::vector<double> fs_t1{res.get_fs()};
|
||||||
|
npy_save("test6/fs_t1.npy", fs_t1);
|
||||||
|
/*
|
||||||
|
* ts_gen = np.arange(sig_res_t1.shape[0]) / fs * 1e9
|
||||||
|
* plt.plot(ts_spiky_t1, a_spiky_t1)
|
||||||
|
* plt.plot(ts_gen, sig_res_t1)
|
||||||
|
*/
|
||||||
|
}
|
||||||
@@ -46,7 +46,7 @@ std::vector<double> fetch_y_axis(npy::npy_data<double>& acc, int dim) {
|
|||||||
return signal;
|
return signal;
|
||||||
}
|
}
|
||||||
|
|
||||||
DebugSsfStepDetectorThreshold::DebugSsfStepDetectorThreshold(size_t len_refr) : SsfStepDetector(len_refr) {}
|
DebugSsfStepDetectorThreshold::DebugSsfStepDetectorThreshold(double fps) : SsfStepDetector(fps) {}
|
||||||
double DebugSsfStepDetectorThreshold::filter(double val) {
|
double DebugSsfStepDetectorThreshold::filter(double val) {
|
||||||
this->SsfStepDetector::filter(val);
|
this->SsfStepDetector::filter(val);
|
||||||
return peek_threshold();
|
return peek_threshold();
|
||||||
|
|||||||
@@ -27,7 +27,7 @@ std::vector<double> fetch_y_axis(npy::npy_data<double>& acc, int dim = 1);
|
|||||||
/** Returns the ssf_threshold as the filter output for debugging. */
|
/** Returns the ssf_threshold as the filter output for debugging. */
|
||||||
class DebugSsfStepDetectorThreshold : public SsfStepDetector {
|
class DebugSsfStepDetectorThreshold : public SsfStepDetector {
|
||||||
public:
|
public:
|
||||||
DebugSsfStepDetectorThreshold(size_t len_refr);
|
DebugSsfStepDetectorThreshold(double fps);
|
||||||
double filter(double val);
|
double filter(double val);
|
||||||
};
|
};
|
||||||
|
|
||||||
|
|||||||
@@ -1,11 +1,11 @@
|
|||||||
project(Pasada_Lib)
|
project(Pasada_Lib)
|
||||||
|
|
||||||
SET(PASADA_SRC
|
SET(PASADA_SRC
|
||||||
library.cpp
|
|
||||||
iir_filter.cpp
|
iir_filter.cpp
|
||||||
ssf_filter.cpp
|
ssf_filter.cpp
|
||||||
pd_signal.cpp
|
pd_signal.cpp
|
||||||
step_detector.cpp
|
step_detector.cpp
|
||||||
|
pd_resamp.cpp
|
||||||
)
|
)
|
||||||
|
|
||||||
if(PASADA_BUILD_TESTS)
|
if(PASADA_BUILD_TESTS)
|
||||||
|
|||||||
@@ -1,6 +0,0 @@
|
|||||||
#ifndef LIBPASADA_LIBRARY_H
|
|
||||||
#define LIBPASADA_LIBRARY_H
|
|
||||||
|
|
||||||
void hello();
|
|
||||||
|
|
||||||
#endif // LIBPASADA_LIBRARY_H
|
|
||||||
51
pasada-lib/include/pd_resamp.h
Normal file
51
pasada-lib/include/pd_resamp.h
Normal file
@@ -0,0 +1,51 @@
|
|||||||
|
//
|
||||||
|
// Created by david on 17.05.2026.
|
||||||
|
//
|
||||||
|
|
||||||
|
#ifndef PASADASUPERPROJECT_PD_RESAMP_H
|
||||||
|
#define PASADASUPERPROJECT_PD_RESAMP_H
|
||||||
|
|
||||||
|
#include "iir_filter.h"
|
||||||
|
|
||||||
|
/** Filter that changes sampling rate between input and output. */
|
||||||
|
class ResamplingFilter {
|
||||||
|
public:
|
||||||
|
ResamplingFilter() {}
|
||||||
|
virtual ~ResamplingFilter() {}
|
||||||
|
virtual void push(double ts, double val) = 0;
|
||||||
|
virtual bool peek() = 0;
|
||||||
|
virtual double get() = 0;
|
||||||
|
};
|
||||||
|
|
||||||
|
/** Normalizes incoming Android sensor sampling rate. */
|
||||||
|
class Resampler : public ResamplingFilter {
|
||||||
|
protected:
|
||||||
|
const size_t INITIAL_SAMPLES = 100;
|
||||||
|
std::vector<double> times;
|
||||||
|
std::vector<double> data;
|
||||||
|
/** circular buffer size */
|
||||||
|
size_t N;
|
||||||
|
/** write index */
|
||||||
|
size_t n;
|
||||||
|
/** read index */
|
||||||
|
size_t m;
|
||||||
|
bool initialized;
|
||||||
|
bool read_valid;
|
||||||
|
/** computed sampling frequency, this will be the output rate */
|
||||||
|
double fs;
|
||||||
|
void compute_fs();
|
||||||
|
public:
|
||||||
|
Resampler();
|
||||||
|
/**
|
||||||
|
* Push a value into the buffer.
|
||||||
|
* Caller is responsible for polling via peek() and get() afterward.
|
||||||
|
* @param ts timestamp in nanoseconds
|
||||||
|
* @param val signal sample
|
||||||
|
*/
|
||||||
|
void push(double ts, double val) override;
|
||||||
|
bool peek() override;
|
||||||
|
double get() override;
|
||||||
|
double get_fs() const;
|
||||||
|
};
|
||||||
|
|
||||||
|
#endif //PASADASUPERPROJECT_PD_RESAMP_H
|
||||||
@@ -40,6 +40,10 @@ namespace pd_signal {
|
|||||||
/** two-dimensional mean of a collection of signals */
|
/** two-dimensional mean of a collection of signals */
|
||||||
void mean(std::vector<double> &out, std::deque<std::vector<double> >& m);
|
void mean(std::vector<double> &out, std::deque<std::vector<double> >& m);
|
||||||
|
|
||||||
|
/** simple mean of 1-d signal */
|
||||||
|
double mean(const std::vector<double>& in);
|
||||||
|
void diff(std::vector<double>& out, const std::vector<double>& in);
|
||||||
|
|
||||||
/**
|
/**
|
||||||
* Convolution of two polynomials given in ASCENDING power order.
|
* Convolution of two polynomials given in ASCENDING power order.
|
||||||
* If <c>p = p_0 + p_1 x + ... + p_{P-1} x^{P-1}</c> and likewise for q,
|
* If <c>p = p_0 + p_1 x + ... + p_{P-1} x^{P-1}</c> and likewise for q,
|
||||||
|
|||||||
@@ -8,7 +8,7 @@
|
|||||||
#include "iir_filter.h"
|
#include "iir_filter.h"
|
||||||
#include <deque>
|
#include <deque>
|
||||||
|
|
||||||
#define FPS 60
|
/** max step rate detected: defines the length of "refractory period" which ignores additional, spurious edges in accelerometer */
|
||||||
#define MAX_BPM 300
|
#define MAX_BPM 300
|
||||||
|
|
||||||
/**
|
/**
|
||||||
@@ -18,11 +18,10 @@
|
|||||||
*/
|
*/
|
||||||
class SsfFilter {
|
class SsfFilter {
|
||||||
protected:
|
protected:
|
||||||
size_t sw;
|
|
||||||
Filt f_delta_u;
|
Filt f_delta_u;
|
||||||
Filt f_window;
|
Filt f_window;
|
||||||
public:
|
public:
|
||||||
SsfFilter(size_t upslope_width);
|
SsfFilter(double fps);
|
||||||
double filter(double val);
|
double filter(double val);
|
||||||
};
|
};
|
||||||
|
|
||||||
@@ -44,16 +43,17 @@ protected:
|
|||||||
size_t n_refr;
|
size_t n_refr;
|
||||||
bool is_refr;
|
bool is_refr;
|
||||||
double ssf_nm1;
|
double ssf_nm1;
|
||||||
|
size_t ssf_usw2;
|
||||||
Filt f_ssf_mean;
|
Filt f_ssf_mean;
|
||||||
public:
|
public:
|
||||||
/**
|
/**
|
||||||
* @param len_refr duration of refractory period, in samples
|
* @param len_refr duration of refractory period, in samples
|
||||||
*/
|
*/
|
||||||
SsfStepDetector(size_t len_refr);
|
SsfStepDetector(double fps);
|
||||||
double filter(double val);
|
double filter(double val);
|
||||||
double peek_threshold();
|
double peek_threshold();
|
||||||
|
|
||||||
static size_t initial_samples();
|
static size_t initial_samples(double fps);
|
||||||
};
|
};
|
||||||
|
|
||||||
/**
|
/**
|
||||||
@@ -115,7 +115,7 @@ protected:
|
|||||||
std::vector<double> ssf_buf;
|
std::vector<double> ssf_buf;
|
||||||
double sqi;
|
double sqi;
|
||||||
public:
|
public:
|
||||||
RunningQualityFilter(size_t upslope_width);
|
RunningQualityFilter(double fps);
|
||||||
double filter(double y, double ssf, double step);
|
double filter(double y, double ssf, double step);
|
||||||
};
|
};
|
||||||
|
|
||||||
|
|||||||
@@ -24,7 +24,6 @@ public:
|
|||||||
class StepDetector {
|
class StepDetector {
|
||||||
protected:
|
protected:
|
||||||
StepListener *listener;
|
StepListener *listener;
|
||||||
IirFilter f_highpass;
|
|
||||||
Filt f_neg;
|
Filt f_neg;
|
||||||
SsfFilter f_ssf;
|
SsfFilter f_ssf;
|
||||||
SsfStepDetector f_ssd;
|
SsfStepDetector f_ssd;
|
||||||
@@ -36,7 +35,7 @@ protected:
|
|||||||
std::vector<double> buf_out;
|
std::vector<double> buf_out;
|
||||||
|
|
||||||
public:
|
public:
|
||||||
StepDetector(StepListener *listener, bool debug = false);
|
StepDetector(double fps, StepListener *listener, bool debug = false);
|
||||||
void filter(std::vector<float> values);
|
void filter(std::vector<float> values);
|
||||||
std::vector<double> getBufSsd();
|
std::vector<double> getBufSsd();
|
||||||
std::vector<double> getBufSqi();
|
std::vector<double> getBufSqi();
|
||||||
@@ -46,7 +45,7 @@ public:
|
|||||||
* Prime the filters using the given input signal.
|
* Prime the filters using the given input signal.
|
||||||
* Used for debugging (non-realtime processing) to align the signal.
|
* Used for debugging (non-realtime processing) to align the signal.
|
||||||
*/
|
*/
|
||||||
void primeFilters(std::vector<double> sig);
|
void primeFilters(double fps, std::vector<double> sig);
|
||||||
};
|
};
|
||||||
|
|
||||||
#endif //PASADASUPERPROJECT_STEP_DETECTOR_H
|
#endif //PASADASUPERPROJECT_STEP_DETECTOR_H
|
||||||
@@ -1,7 +0,0 @@
|
|||||||
#include "library.h"
|
|
||||||
|
|
||||||
#include <iostream>
|
|
||||||
|
|
||||||
void hello() {
|
|
||||||
std::cout << "Hello, World!" << std::endl;
|
|
||||||
}
|
|
||||||
103
pasada-lib/pd_resamp.cpp
Normal file
103
pasada-lib/pd_resamp.cpp
Normal file
@@ -0,0 +1,103 @@
|
|||||||
|
//
|
||||||
|
// Created by david on 17.05.2026.
|
||||||
|
//
|
||||||
|
|
||||||
|
#include "pd_resamp.h"
|
||||||
|
#include "pd_signal.h"
|
||||||
|
|
||||||
|
Resampler::Resampler(): N(INITIAL_SAMPLES+1), n(0), m(0), initialized(false), read_valid(false), fs(0.0) {
|
||||||
|
times.resize(N);
|
||||||
|
data.resize(N);
|
||||||
|
times.assign(N, 0.0);
|
||||||
|
data.assign(N, 0.0);
|
||||||
|
}
|
||||||
|
|
||||||
|
void Resampler::push(double ts, double val) {
|
||||||
|
// i: previous write position
|
||||||
|
auto i = static_cast<size_t>((static_cast<int>(n) - 1 + static_cast<int>(N)) % static_cast<int>(N));
|
||||||
|
auto im = static_cast<size_t>((static_cast<int>(m) - 1 + static_cast<int>(N)) % static_cast<int>(N));
|
||||||
|
if (ts < times[i]) throw std::invalid_argument("we expect ts to be time-ascending");
|
||||||
|
// j: current write position
|
||||||
|
auto j = n;
|
||||||
|
times[n] = ts;
|
||||||
|
data[n] = val;
|
||||||
|
n = (n+1) % N;
|
||||||
|
// note: we do not currently handle overrun (assume caller keeps contract)
|
||||||
|
if (n == INITIAL_SAMPLES && !initialized) {
|
||||||
|
compute_fs();
|
||||||
|
read_valid = true;
|
||||||
|
return; // returns INITIAL_SAMPLES all at once
|
||||||
|
// ??? need to compute 'dt' etc. for last sample! -> fall through
|
||||||
|
}
|
||||||
|
// once initialized, we skip ahead as much as possible - avoid buffering too much
|
||||||
|
double dt = ts - times[im];
|
||||||
|
double dtr = dt * 1e-9 * fs;
|
||||||
|
if (dtr < 0) { throw std::invalid_argument("dt is negative"); }
|
||||||
|
// case 1: 'ts' is less than next sample
|
||||||
|
if (dtr < 0.99) {
|
||||||
|
// drop samples (cannot be bothered with interpolation):
|
||||||
|
// practice shows that Android initially provides a high sampling rate, which subsequently drops later on,
|
||||||
|
// so we simply skip the implementation here.
|
||||||
|
read_valid = false;
|
||||||
|
return;
|
||||||
|
}
|
||||||
|
// case 2: 'ts' is exactly next sample
|
||||||
|
if (0.99 < dtr && dtr < 1.01) {
|
||||||
|
m = j; // skip directly to actual sample
|
||||||
|
read_valid = true;
|
||||||
|
return;
|
||||||
|
}
|
||||||
|
// case 3: 'ts' skips samples
|
||||||
|
if (dtr >= 1.01) {
|
||||||
|
auto ts_nm1 = times[i];
|
||||||
|
// x = ts[n-1] + np.linspace(1.0, dtr, int(np.round(dtr)), endpoint=True) / fs * 1e9
|
||||||
|
// xp = [ts[n-1], ts[n]]
|
||||||
|
// fp = [a[n-1], a[n]]
|
||||||
|
// y = np.interp(x, xp, fp)
|
||||||
|
std::vector<double> y;
|
||||||
|
std::vector<double> x;
|
||||||
|
std::vector<double> xp { times[i], ts };
|
||||||
|
std::vector<double> fp { data[i], val };
|
||||||
|
pd_signal::linspace(x, 1.0, dtr, static_cast<int>(round(dtr)), false);
|
||||||
|
for (auto& e : x) e = ts_nm1 + e / fs * 1e9;
|
||||||
|
pd_signal::interp(y, x, xp, fp);
|
||||||
|
// write to data[_ : n]
|
||||||
|
int s = static_cast<int>(x.size());
|
||||||
|
auto p0 = static_cast<size_t>((static_cast<int>(n) - s + static_cast<int>(N)) % static_cast<int>(N));
|
||||||
|
for (int p = 0; p < s; p++) {
|
||||||
|
data[(p0 + p) % N] = y[p];
|
||||||
|
}
|
||||||
|
m = p0; // provides round(dtr) samples output, interpolated
|
||||||
|
read_valid = true;
|
||||||
|
return;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
bool Resampler::peek() {
|
||||||
|
if (!initialized) { return false; }
|
||||||
|
if (!read_valid) { return false; }
|
||||||
|
return n != m;
|
||||||
|
}
|
||||||
|
|
||||||
|
double Resampler::get() {
|
||||||
|
if (!initialized) { throw std::runtime_error("not initialized"); }
|
||||||
|
if (n == m) { throw std::runtime_error("empty buffer"); }
|
||||||
|
double val = data[m];
|
||||||
|
m = (m+1) % N;
|
||||||
|
return val;
|
||||||
|
}
|
||||||
|
|
||||||
|
double Resampler::get_fs() const {
|
||||||
|
return fs;
|
||||||
|
}
|
||||||
|
|
||||||
|
void Resampler::compute_fs() {
|
||||||
|
// compute 'fs' according to first INITIAL_SAMPLES
|
||||||
|
// we ignore 'n' as this is only ever called once per Resampler lifetime, and assume 'times' has been filled from 0 on
|
||||||
|
std::vector<double> delta_times;
|
||||||
|
pd_signal::diff(delta_times, times);
|
||||||
|
delta_times.resize(INITIAL_SAMPLES-1); // trim off trailing buffer slot (which is not filled)
|
||||||
|
double mean_dt = pd_signal::mean(delta_times);
|
||||||
|
fs = 1e9 / mean_dt;
|
||||||
|
initialized = true;
|
||||||
|
}
|
||||||
@@ -6,6 +6,7 @@
|
|||||||
#include <stdexcept>
|
#include <stdexcept>
|
||||||
#include <algorithm>
|
#include <algorithm>
|
||||||
#include <iostream>
|
#include <iostream>
|
||||||
|
#include <numeric>
|
||||||
|
|
||||||
namespace pd_signal {
|
namespace pd_signal {
|
||||||
|
|
||||||
@@ -141,6 +142,25 @@ void mean(std::vector<double> &out, std::deque<std::vector<double> >& m) {
|
|||||||
mean_tpl(out, m);
|
mean_tpl(out, m);
|
||||||
}
|
}
|
||||||
|
|
||||||
|
double mean(const std::vector<double> &in) {
|
||||||
|
if (in.empty()) {
|
||||||
|
throw std::invalid_argument("mean: input vector is empty");
|
||||||
|
}
|
||||||
|
double sum = std::accumulate(in.begin(), in.end(), 0.0);
|
||||||
|
return sum / static_cast<double>(in.size());
|
||||||
|
}
|
||||||
|
|
||||||
|
void diff(std::vector<double>& out, const std::vector<double>& in) {
|
||||||
|
if (in.size() < 2) {
|
||||||
|
out.clear();
|
||||||
|
return;
|
||||||
|
}
|
||||||
|
out.resize(in.size() - 1);
|
||||||
|
for (std::size_t i = 1; i < in.size(); ++i) {
|
||||||
|
out[i - 1] = in[i] - in[i - 1];
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
// Convolution of two polynomials in ascending power order.
|
// Convolution of two polynomials in ascending power order.
|
||||||
void polymul(std::vector<cplx>& out,
|
void polymul(std::vector<cplx>& out,
|
||||||
const std::vector<cplx>& p, const std::vector<cplx>& q) {
|
const std::vector<cplx>& p, const std::vector<cplx>& q) {
|
||||||
|
|||||||
@@ -27,11 +27,18 @@ static std::vector<double> make_ones(size_t sw) {
|
|||||||
return ones;
|
return ones;
|
||||||
}
|
}
|
||||||
|
|
||||||
SsfFilter::SsfFilter(size_t upslope_width) :
|
static int get_upslope_width(double fps) {
|
||||||
sw(upslope_width),
|
// was 4 at 60 fps = 66.7 ms
|
||||||
|
if (fps == 4.0) throw std::invalid_argument("check SsfFilter ctor call, must pass fps now"); // nice-to remove
|
||||||
|
int usw = static_cast<int>(std::round(0.0667 * fps));
|
||||||
|
if (usw == 0) throw std::invalid_argument("upslope_width = 0 computed - low fps?");
|
||||||
|
return usw;
|
||||||
|
}
|
||||||
|
|
||||||
|
SsfFilter::SsfFilter(double fps) :
|
||||||
// Filt(N, shift, offset, taps)
|
// Filt(N, shift, offset, taps)
|
||||||
f_delta_u(2, 0, 0, std::vector<double> {1.0, -1.0}),
|
f_delta_u(2, 0, 0, std::vector<double> {1.0, -1.0}),
|
||||||
f_window(upslope_width, 0, 0, make_ones(upslope_width))
|
f_window(get_upslope_width(fps), 0, 0, make_ones(get_upslope_width(fps)))
|
||||||
{}
|
{}
|
||||||
double SsfFilter::filter(double val) {
|
double SsfFilter::filter(double val) {
|
||||||
double du = f_delta_u.filter(val);
|
double du = f_delta_u.filter(val);
|
||||||
@@ -40,18 +47,41 @@ double SsfFilter::filter(double val) {
|
|||||||
return ssf;
|
return ssf;
|
||||||
}
|
}
|
||||||
|
|
||||||
size_t SsfStepDetector::initial_samples() { return (size_t) (3.0 * FPS); }
|
|
||||||
|
|
||||||
SsfStepDetector::SsfStepDetector(size_t len_refr) :
|
static size_t get_initial_samples(double fps) {
|
||||||
|
if (fps == 12.0) throw std::invalid_argument("check SsfStepDetector ctor call, must pass fps now"); // nice-to remove
|
||||||
|
int init_samp = static_cast<int>(std::round(3.0 * fps));
|
||||||
|
if (init_samp == 0) throw std::invalid_argument("init_samp = 0 computed - low fps?");
|
||||||
|
return init_samp;
|
||||||
|
}
|
||||||
|
|
||||||
|
size_t SsfStepDetector::initial_samples(double fps) { return get_initial_samples(fps); }
|
||||||
|
|
||||||
|
static size_t get_len_refr(double fps) {
|
||||||
|
if (fps == 12.0) throw std::invalid_argument("check SsfStepDetector ctor call, must pass fps now"); // nice-to remove
|
||||||
|
size_t len_refr = static_cast<size_t>(std::round(fps / (MAX_BPM / 60)));
|
||||||
|
if (len_refr == 0) throw std::invalid_argument("len_refr = 0 computed - low fps?");
|
||||||
|
return len_refr;
|
||||||
|
}
|
||||||
|
|
||||||
|
static int get_len_ssf_th_smoothing(double fps) {
|
||||||
|
// was 6 at 60 fps = 100 ms
|
||||||
|
if (fps == 12.0) throw std::invalid_argument("check SsfStepDetector ctor call, must pass fps now"); // nice-to remove
|
||||||
|
int sts = static_cast<int>(std::round(0.100 * fps));
|
||||||
|
if (sts == 0) throw std::invalid_argument("len_ssf_th_smoothing = 0 computed - low fps?");
|
||||||
|
return sts;
|
||||||
|
}
|
||||||
|
SsfStepDetector::SsfStepDetector(double fps) :
|
||||||
// note: also change above, in initial_samples()
|
// note: also change above, in initial_samples()
|
||||||
LEN_INIT((size_t) (3.0 * FPS)), // initial window length for ssf_threshold
|
LEN_INIT(get_initial_samples(fps)), // initial window length for ssf_threshold
|
||||||
LEN_TH_WIN((size_t) (3.0 * FPS)), // subsequent window length for ssf_threshold
|
LEN_TH_WIN(get_initial_samples(fps)), // subsequent window length for ssf_threshold
|
||||||
num_samples(0),
|
num_samples(0),
|
||||||
ssf_threshold(std::numeric_limits<double>::infinity()),
|
ssf_threshold(std::numeric_limits<double>::infinity()),
|
||||||
ssf_threshold_nm1(std::numeric_limits<double>::infinity()),
|
ssf_threshold_nm1(std::numeric_limits<double>::infinity()),
|
||||||
f_ssf_threshold_smoothing(6, 0, 0, make_ones(6)),
|
f_ssf_threshold_smoothing(get_len_ssf_th_smoothing(fps), 0, 0, make_ones(get_len_ssf_th_smoothing(fps))),
|
||||||
len_refr(len_refr), n_refr(0), is_refr(false),
|
len_refr(get_len_refr(fps)), n_refr(0), is_refr(false),
|
||||||
ssf_nm1(0.0),
|
ssf_nm1(0.0),
|
||||||
|
ssf_usw2(get_upslope_width(fps)/2),
|
||||||
f_ssf_mean(LEN_TH_WIN, 0, 0, make_ones(LEN_TH_WIN))
|
f_ssf_mean(LEN_TH_WIN, 0, 0, make_ones(LEN_TH_WIN))
|
||||||
{
|
{
|
||||||
assert (LEN_INIT >= LEN_TH_WIN && "LEN_INIT < LEN_TH_WIN, check normalization of initial ssf_threshold");
|
assert (LEN_INIT >= LEN_TH_WIN && "LEN_INIT < LEN_TH_WIN, check normalization of initial ssf_threshold");
|
||||||
@@ -89,12 +119,10 @@ double SsfStepDetector::filter(double ssf) {
|
|||||||
} else if (num_samples > LEN_TH_WIN) {
|
} else if (num_samples > LEN_TH_WIN) {
|
||||||
//DEBUG_PRINT(std::cerr << "adaptive threshold setting" << std::endl);
|
//DEBUG_PRINT(std::cerr << "adaptive threshold setting" << std::endl);
|
||||||
// adaptive threshold setting
|
// adaptive threshold setting
|
||||||
// +2 is half the window size
|
// the ssf peak comes SsfFilter.upslope_width/2 = 3 samples (half-window + 1 sample) after the crossing
|
||||||
// TODO: param upon SsfFilter.upslope_width/2 instead of hardcoding -- also f_ssf_threshold_smoothing(), nb. should be even number
|
if (num_samples == n_refr + ssf_usw2 + 1) {
|
||||||
if (num_samples == n_refr + 2) {
|
|
||||||
//DEBUG_PRINT(std::cerr << "setting adaptive threshold setting" << std::endl);
|
//DEBUG_PRINT(std::cerr << "setting adaptive threshold setting" << std::endl);
|
||||||
ssf_threshold_nm1 = ssf_threshold;
|
ssf_threshold_nm1 = ssf_threshold;
|
||||||
// the ssf peak comes 3 samples (half-window + 1 sample) after the crossing
|
|
||||||
ssf_threshold = f_ssf_threshold_smoothing.filter(ssf) / ((double) f_ssf_threshold_smoothing.size()) * 0.6;
|
ssf_threshold = f_ssf_threshold_smoothing.filter(ssf) / ((double) f_ssf_threshold_smoothing.size()) * 0.6;
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
@@ -193,7 +221,7 @@ bool RunningQuality::append(std::vector<double> &rawBeat, std::vector<double> &r
|
|||||||
}
|
}
|
||||||
|
|
||||||
|
|
||||||
RunningQualityFilter::RunningQualityFilter(size_t upslope_width) : sqi(0.0) {}
|
RunningQualityFilter::RunningQualityFilter(double fps) : sqi(0.0) {}
|
||||||
|
|
||||||
double RunningQualityFilter::filter(double y, double ssf, double step) {
|
double RunningQualityFilter::filter(double y, double ssf, double step) {
|
||||||
if (step == 1.0) {
|
if (step == 1.0) {
|
||||||
|
|||||||
@@ -4,39 +4,18 @@
|
|||||||
|
|
||||||
#include "step_detector.h"
|
#include "step_detector.h"
|
||||||
|
|
||||||
// TODO: we are hardcoding filter coefficients for 60 Hz
|
StepDetector::StepDetector(double fps, StepListener *listener, bool debug) :
|
||||||
// TODO: this is tolerable for 50 Hz
|
|
||||||
|
|
||||||
// TODO: check if we can do with floats instead of doubles
|
|
||||||
// (check how much the [already bad] accuracy of filtering suffers)
|
|
||||||
|
|
||||||
// TODO: in Java, check if delta timestamps effectively match FPS
|
|
||||||
// TODO: FPS constant should be passed as argument to C++ (but we keep an FPS define to validate the coefficients)
|
|
||||||
|
|
||||||
// Butterworth filter: order=5, fc=0.5, fs=60, btype='highpass'
|
|
||||||
static std::vector<double> hpf_taps_b {0.91875845, -4.59379227, 9.18758454, -9.18758454, 4.59379227, -0.91875845};
|
|
||||||
static std::vector<double> hpf_taps_a {1. , -4.83056552, 9.33652742, -9.02545247, 4.36360803, -0.8441171};
|
|
||||||
static size_t upslope_width = 4;
|
|
||||||
const size_t len_refr = (size_t) (FPS / (MAX_BPM / 60));
|
|
||||||
|
|
||||||
StepDetector::StepDetector(StepListener *listener, bool debug) :
|
|
||||||
listener(listener),
|
listener(listener),
|
||||||
f_highpass(hpf_taps_b, hpf_taps_a),
|
|
||||||
f_neg(1, 0, 0, std::vector<double> {-1.0}),
|
f_neg(1, 0, 0, std::vector<double> {-1.0}),
|
||||||
f_ssf(upslope_width),
|
f_ssf(fps),
|
||||||
f_ssd(len_refr),
|
f_ssd(fps),
|
||||||
f_sqi(upslope_width),
|
f_sqi(fps),
|
||||||
debug(debug)
|
debug(debug)
|
||||||
{}
|
{}
|
||||||
|
|
||||||
#if (FPS != 60)
|
|
||||||
#error "FPS must currently be 60, as highpass taps are pre-computed for that value"
|
|
||||||
#endif
|
|
||||||
|
|
||||||
void StepDetector::filter(std::vector<float> values) {
|
void StepDetector::filter(std::vector<float> values) {
|
||||||
// TODO: later on, we should use a vector projection towards gravity
|
// TODO: later on, we should use a vector projection towards gravity
|
||||||
auto s0 = (double) values[1]; // take y-axis value for now
|
auto s1 = (double) values[1]; // take y-axis value for now
|
||||||
auto s1 = f_highpass.filter(s0);
|
|
||||||
auto s2 = f_neg.filter(s1);
|
auto s2 = f_neg.filter(s1);
|
||||||
auto s3 = f_ssf.filter(s2);
|
auto s3 = f_ssf.filter(s2);
|
||||||
auto s4 = f_ssd.filter(s3);
|
auto s4 = f_ssd.filter(s3);
|
||||||
@@ -56,8 +35,8 @@ std::vector<double> StepDetector::getBufSsd() { return buf_ssd; }
|
|||||||
std::vector<double> StepDetector::getBufSqi() { return buf_sqi; }
|
std::vector<double> StepDetector::getBufSqi() { return buf_sqi; }
|
||||||
std::vector<double> StepDetector::getBufOut() { return buf_out; }
|
std::vector<double> StepDetector::getBufOut() { return buf_out; }
|
||||||
|
|
||||||
void StepDetector::primeFilters(std::vector<double> sig) {
|
void StepDetector::primeFilters(double fps, std::vector<double> sig) {
|
||||||
const size_t N_INIT = SsfStepDetector::initial_samples();
|
const size_t N_INIT = SsfStepDetector::initial_samples(fps);
|
||||||
// initialize: feed for priming the filters
|
// initialize: feed for priming the filters
|
||||||
for (size_t i = 0; i < N_INIT; i++) {
|
for (size_t i = 0; i < N_INIT; i++) {
|
||||||
const auto a_i = static_cast<float>(sig[i]);
|
const auto a_i = static_cast<float>(sig[i]);
|
||||||
|
|||||||
Reference in New Issue
Block a user