initial

sql/firstday/urine_output_first_day.sql

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+-- THIS SCRIPT IS AUTOMATICALLY GENERATED. DO NOT EDIT IT DIRECTLY.
+DROP TABLE IF EXISTS urine_output_first_day; CREATE TABLE urine_output_first_day AS 
+-- ------------------------------------------------------------------
+-- Purpose: Create a view of the urine output for each ICUSTAY_ID over the first 24 hours.
+-- ------------------------------------------------------------------
+
+select
+  -- patient identifiers
+  ie.subject_id, ie.hadm_id, ie.icustay_id
+
+  -- volumes associated with urine output ITEMIDs
+  , sum(
+      -- we consider input of GU irrigant as a negative volume
+      case
+        when oe.itemid = 227488 and oe.value > 0 then -1*oe.value
+        else oe.value
+    end) as urineoutput
+FROM icustays ie
+-- Join to the outputevents table to get urine output
+left join outputevents oe
+-- join on all patient identifiers
+on ie.subject_id = oe.subject_id and ie.hadm_id = oe.hadm_id and ie.icustay_id = oe.icustay_id
+-- and ensure the data occurs during the first day
+and oe.charttime between ie.intime and (DATETIME_ADD(ie.intime, INTERVAL '1' DAY)) -- first ICU day
+where itemid in
+(
+-- these are the most frequently occurring urine output observations in CareVue
+40055, -- "Urine Out Foley"
+43175, -- "Urine ."
+40069, -- "Urine Out Void"
+40094, -- "Urine Out Condom Cath"
+40715, -- "Urine Out Suprapubic"
+40473, -- "Urine Out IleoConduit"
+40085, -- "Urine Out Incontinent"
+40057, -- "Urine Out Rt Nephrostomy"
+40056, -- "Urine Out Lt Nephrostomy"
+40405, -- "Urine Out Other"
+40428, -- "Urine Out Straight Cath"
+40086,--	Urine Out Incontinent
+40096, -- "Urine Out Ureteral Stent #1"
+40651, -- "Urine Out Ureteral Stent #2"
+
+-- these are the most frequently occurring urine output observations in MetaVision
+226559, -- "Foley"
+226560, -- "Void"
+226561, -- "Condom Cath"
+226584, -- "Ileoconduit"
+226563, -- "Suprapubic"
+226564, -- "R Nephrostomy"
+226565, -- "L Nephrostomy"
+226567, --	Straight Cath
+226557, -- R Ureteral Stent
+226558, -- L Ureteral Stent
+227488, -- GU Irrigant Volume In
+227489  -- GU Irrigant/Urine Volume Out
+)
+group by ie.subject_id, ie.hadm_id, ie.icustay_id
+order by ie.subject_id, ie.hadm_id, ie.icustay_id;